Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF11940 across 148 genomes · 21 ms.

Species with hits:Hydra oligactis 3Calvadosia cruxmelitensis 2Aurelia aurita complex sp. Pacific 1Cassiopea xamachana 1Hydra viridissima 1Palythoa mizigama 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1109.g15.t1PF11940Domain of unknown function (DUF3458) Ig-like foldInterproscanJBrowse
Calvadosia cruxmelitensisg803.t1PF11940Domain of unknown function (DUF3458) Ig-like foldInterproscanJBrowse
Calvadosia cruxmelitensisg29.t1PF11940Domain of unknown function (DUF3458) Ig-like foldInterproscanJBrowse
Cassiopea xamachanaCxam_g778.t1PF11940Domain of unknown function (DUF3458) Ig-like foldInterproscanJBrowse
Hydra oligactisHOLI00001.G51294PF11940Domain of unknown function (DUF3458) Ig-like foldInterproscanJBrowse
Hydra oligactisHOLI02195.G14068PF11940Domain of unknown function (DUF3458) Ig-like foldInterproscanJBrowse
Hydra oligactisHOLI01031.G12818PF11940Domain of unknown function (DUF3458) Ig-like foldInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023933.1PF11940Domain of unknown function (DUF3458) Ig-like foldInterproscanJBrowse
Palythoa mizigamac1935.g003.t1.p1PF11940Domain of unknown function (DUF3458) Ig-like foldInterproscanJBrowse

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