Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF12625 across 148 genomes · 52 ms.

Species with hits:Hydra oligactis 5Aurelia aurita complex sp. Pacific 1Cassiopea xamachana 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1132.g1.t1PF12625Arabinose-binding domain of AraC transcription regulator, N-termInterproscanJBrowse
Cassiopea xamachanaCxam_g880.t1PF12625Arabinose-binding domain of AraC transcription regulator, N-termInterproscanJBrowse
Hydra oligactisHOLI00001.G51301PF12625Arabinose-binding domain of AraC transcription regulator, N-termInterproscanJBrowse
Hydra oligactisHOLI00001.G52919PF12625Arabinose-binding domain of AraC transcription regulator, N-termInterproscanJBrowse
Hydra oligactisHOLI00059.G25557PF12625Arabinose-binding domain of AraC transcription regulator, N-termInterproscanJBrowse
Hydra oligactisHOLI00504.G55306PF12625Arabinose-binding domain of AraC transcription regulator, N-termInterproscanJBrowse
Hydra oligactisHOLI00001.G50742PF12625Arabinose-binding domain of AraC transcription regulator, N-termInterproscanJBrowse

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