Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 99 gene–annotation pairs matching PF12833 across 148 genomes · 34 ms.

Species with hits:Hydra oligactis 81Cassiopea xamachana 13Aurelia aurita complex sp. Pacific 3Calvadosia cruxmelitensis 1Thelohanellus kitauei 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold738.g17.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold1930.g1.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold228.g16.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Calvadosia cruxmelitensisg377.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2899.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g13554.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g236.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g13549.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g880.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g3531.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g1488.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g1284.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g1077.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2057.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2626.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g13192.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2045.t1PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI04196.G44722PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55366PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI01051.G37033PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51032PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49392PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI03105.G4948PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52528PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51301PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G18078PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI01051.G37205PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50460PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00264.G3312PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9832PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55329PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G21730PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53345PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00522.G17000PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00592.G58890PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI01031.G12901PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI01423.G1484PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9701PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G20506PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49644PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00150.G2265PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G17427PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52919PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9798PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50377PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G18032PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00522.G16827PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10492PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI02150.G23155PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50142PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G18970PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9527PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00059.G25984PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53441PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00150.G2315PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51860PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00643.G16109PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00299.G46916PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49544PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G20068PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49596PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G20319PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50811PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00299.G46906PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G20239PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51928PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51019PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00059.G25557PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55303PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9770PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00643.G16154PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00264.G3183PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9960PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55306PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50685PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51751PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI01937.G38316PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G19716PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00592.G58851PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55253PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9702PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G21154PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51743PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49781PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55258PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49917PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00059.G25694PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00643.G15981PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49383PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00353.G43136PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI01051.G37071PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI02137.G15346PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G22126PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50289PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50742PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00002.G21904PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50549PF12833Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52522PF12833Helix-turn-helix domainInterproscanJBrowse
Thelohanellus kitaueiKII72355.1PF12833Helix-turn-helix domainInterproscanJBrowse

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