Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF12860 across 148 genomes · 7865 ms.

Species with hits:HOLIG 8CXAMA 6MGRIS 3AAURI2 2
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold272.g2.t1PF12860PAS foldInterproscanJBrowse
AAURI2scaffold683.g41.t1PF12860PAS foldInterproscanJBrowse
CXAMACxam_g13580.t1PF12860PAS foldInterproscanJBrowse
CXAMACxam_g3364.t1PF12860PAS foldInterproscanJBrowse
CXAMACxam_g3364.t1PF12860PAS foldInterproscanJBrowse
CXAMACxam_g3401.t1PF12860PAS foldInterproscanJBrowse
CXAMACxam_g28402.t1PF12860PAS foldInterproscanJBrowse
CXAMACxam_g303.t1PF12860PAS foldInterproscanJBrowse
HOLIGHOLI00059.G26175PF12860PAS foldInterproscanJBrowse
HOLIGHOLI00522.G16804PF12860PAS foldInterproscanJBrowse
HOLIGHOLI02969.G47626PF12860PAS foldInterproscanJBrowse
HOLIGHOLI00001.G51546PF12860PAS foldInterproscanJBrowse
HOLIGHOLI00643.G15867PF12860PAS foldInterproscanJBrowse
HOLIGHOLI00622.G31276PF12860PAS foldInterproscanJBrowse
HOLIGHOLI00001.G50600PF12860PAS foldInterproscanJBrowse
HOLIGHOLI00001.G50600PF12860PAS foldInterproscanJBrowse
MGRISANN24754-RAPF12860PAS foldInterproscanJBrowse
MGRISANN24754-RAPF12860PAS foldInterproscanJBrowse
MGRISANN39744-RAPF12860PAS foldInterproscanJBrowse

TOP