Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PF13298 across 148 genomes · 20 ms.

Species with hits:Hydra oligactis 2Cassiopea xamachana 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g14555.t1PF13298DNA polymerase Ligase (LigD)InterproscanJBrowse
Hydra oligactisHOLI00002.G21382PF13298DNA polymerase Ligase (LigD)InterproscanJBrowse
Hydra oligactisHOLI00001.G49418PF13298DNA polymerase Ligase (LigD)InterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022984.1PF13298DNA polymerase Ligase (LigD)InterproscanJBrowse

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