Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 20 gene–annotation pairs matching PF13377 across 148 genomes · 45 ms.

Species with hits:Hydra oligactis 12Cassiopea xamachana 6Aurelia aurita complex sp. Pacific 1Thelohanellus kitauei 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g219.t1PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2911.t1PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g3514.t1PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g7259.t1PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2975.t1PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g6210.t1PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g13536.t1PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00522.G16762PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI02137.G15345PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00002.G18834PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00592.G58979PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00150.G1866PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00264.G3138PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50021PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9672PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9854PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00299.G47010PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00256.G40924PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Hydra oligactisHOLI00353.G43032PF13377Periplasmic binding protein-like domainInterproscanJBrowse
Thelohanellus kitaueiKII65025.1PF13377Periplasmic binding protein-like domainInterproscanJBrowse

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