Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 15 gene–annotation pairs matching PF13505 across 148 genomes · 27 ms.

Species with hits:Hydra oligactis 7Cassiopea xamachana 5Aurelia aurita complex sp. Pacific 2Montipora grisea 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold862.g22.t1PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold10.g144.t1PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Cassiopea xamachanaCxam_g231.t1PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2195.t1PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Cassiopea xamachanaCxam_g1380.t1PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Cassiopea xamachanaCxam_g6193.t1PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Cassiopea xamachanaCxam_g4251.t1PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Hydra oligactisHOLI00002.G17445PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Hydra oligactisHOLI00256.G41041PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Hydra oligactisHOLI00059.G25699PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10044PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Hydra oligactisHOLI00299.G46547PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Hydra oligactisHOLI00691.G34987PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9410PF13505Outer membrane protein beta-barrel domainInterproscanJBrowse
Montipora griseaANN25651-RAPF13505Outer membrane protein beta-barrel domainInterproscanJBrowse

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