Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF13609 across 148 genomes · 20 ms.

Species with hits:Aurelia aurita complex sp. Pacific 6Hydra oligactis 6Hydra viridissima 3Calvadosia cruxmelitensis 2Cassiopea xamachana 2
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1134.g4.t1PF13609Gram-negative porinInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold1747.g11.t1PF13609Gram-negative porinInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold228.g14.t1PF13609Gram-negative porinInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold228.g15.t1PF13609Gram-negative porinInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold10.g158.t1PF13609Gram-negative porinInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold3481.g2.t1PF13609Gram-negative porinInterproscanJBrowse
Calvadosia cruxmelitensisg867.t1PF13609Gram-negative porinInterproscanJBrowse
Calvadosia cruxmelitensisg723.t1PF13609Gram-negative porinInterproscanJBrowse
Cassiopea xamachanaCxam_g2534.t1PF13609Gram-negative porinInterproscanJBrowse
Cassiopea xamachanaCxam_g2602.t1PF13609Gram-negative porinInterproscanJBrowse
Hydra oligactisHOLI00643.G15770PF13609Gram-negative porinInterproscanJBrowse
Hydra oligactisHOLI00059.G25904PF13609Gram-negative porinInterproscanJBrowse
Hydra oligactisHOLI00014.G9585PF13609Gram-negative porinInterproscanJBrowse
Hydra oligactisHOLI00059.G25669PF13609Gram-negative porinInterproscanJBrowse
Hydra oligactisHOLI00059.G25670PF13609Gram-negative porinInterproscanJBrowse
Hydra oligactisHOLI03869.G56370PF13609Gram-negative porinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023836.1PF13609Gram-negative porinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022386.1PF13609Gram-negative porinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023220.1PF13609Gram-negative porinInterproscanJBrowse

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