Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF16273 across 148 genomes · 6494 ms.

Species with hits:HCOER 3CMOSA 2AAURI1 1CSP1 1CXAMA 1EVERR 1MPAPU 1NNOMU 1RESCU 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold15.g62.t1PF16273Nuclear distribution C domainInterproscanJBrowse
CMOSAENSSJYP00000014520.1PF16273Nuclear distribution C domainInterproscanJBrowse
CMOSAENSSJYP00000014536.1PF16273Nuclear distribution C domainInterproscanJBrowse
CSP1Csp0G069090PF16273Nuclear distribution C domainInterproscanJBrowse
CXAMACxam_g10810.t1PF16273Nuclear distribution C domainInterproscanJBrowse
EVERRENSNOVP00005032117.1PF16273Nuclear distribution C domainInterproscanJBrowse
HCOERENSBQFP00000020871.1PF16273Nuclear distribution C domainInterproscanJBrowse
HCOERENSBQFP00000020855.1PF16273Nuclear distribution C domainInterproscanJBrowse
HCOERENSBQFP00000020866.1PF16273Nuclear distribution C domainInterproscanJBrowse
MPAPUBRAKERKYLP00000002895.1PF16273Nuclear distribution C domainInterproscanJBrowse
NNOMUBRAKERMNPP00000004168.1PF16273Nuclear distribution C domainInterproscanJBrowse
RESCUXP_065057058.1PF16273Nuclear distribution C domainInterproscanJBrowse

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