Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF17092 across 148 genomes · 8 ms.

Species with hits:Hydra oligactis 3Calvadosia cruxmelitensis 2Hydra viridissima 2Aurelia aurita complex sp. Pacific 1Cassiopea xamachana 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold683.g6.t1PF17092Penicillin-binding protein OB-like domainInterproscanJBrowse
Calvadosia cruxmelitensisg1976.t1PF17092Penicillin-binding protein OB-like domainInterproscanJBrowse
Calvadosia cruxmelitensisg871.t1PF17092Penicillin-binding protein OB-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g1561.t1PF17092Penicillin-binding protein OB-like domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52567PF17092Penicillin-binding protein OB-like domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10583PF17092Penicillin-binding protein OB-like domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9902PF17092Penicillin-binding protein OB-like domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022875.1PF17092Penicillin-binding protein OB-like domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023319.1PF17092Penicillin-binding protein OB-like domainInterproscanJBrowse

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