Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF17289 across 148 genomes · 38 ms.

Species with hits:Cassiopea xamachana 2Mastigias papua 2Stylophora pistillata 2Hydractinia symbiolongicarpus 1
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g14695.t1PF17289Terminase RNaseH-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2552.t1PF17289Terminase RNaseH-like domainInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02519_t1PF17289Terminase RNaseH-like domainInterproscanJBrowse
Mastigias papuaBRAKERKYLP00000026560.1PF17289Terminase RNaseH-like domainInterproscanJBrowse
Mastigias papuaBRAKERKYLP00000026479.1PF17289Terminase RNaseH-like domainInterproscanJBrowse
Stylophora pistillataPFX11398.1PF17289Terminase RNaseH-like domainInterproscanJBrowse
Stylophora pistillataPFX12345.1PF17289Terminase RNaseH-like domainInterproscanJBrowse

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