Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF18317 across 148 genomes · 34 ms.

Species with hits:Hydra oligactis 4Aurelia aurita complex sp. Pacific 1Cassiopea xamachana 1Duncanopsammia axifuga 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold272.g23.t1PF18317Shikimate 5'-dehydrogenase C-terminal domainInterproscanJBrowse
Cassiopea xamachanaCxam_g28419.t1PF18317Shikimate 5'-dehydrogenase C-terminal domainInterproscanJBrowse
Duncanopsammia axifugaENSXFYP00000028736.1PF18317Shikimate 5'-dehydrogenase C-terminal domainInterproscanJBrowse
Hydra oligactisHOLI01051.G37121PF18317Shikimate 5'-dehydrogenase C-terminal domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52823PF18317Shikimate 5'-dehydrogenase C-terminal domainInterproscanJBrowse
Hydra oligactisHOLI00256.G40411PF18317Shikimate 5'-dehydrogenase C-terminal domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53481PF18317Shikimate 5'-dehydrogenase C-terminal domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023052.1PF18317Shikimate 5'-dehydrogenase C-terminal domainInterproscanJBrowse

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