Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 25 gene–annotation pairs matching PF19296 across 148 genomes · 7468 ms.

Species with hits:MGRIS 17HOLIG 3CXAMA 2HVIRI 2AAURI2 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold10.g189.t1PF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
CXAMACxam_g2123.t1PF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
CXAMACxam_g2123.t1PF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
HOLIGHOLI00001.G51577PF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
HOLIGHOLI00001.G52953PF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
HOLIGHOLI00353.G43139PF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
HVIRIg20739.t1.1PF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
HVIRIBRAKERKREP00000023509.1PF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN33279-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN33279-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN33699-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN33989-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN34432-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN39248-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN30499-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN40469-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN28600-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN39949-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN36282-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN24916-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN32259-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN31521-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN38475-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN38602-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse
MGRISANN37092-RAPF19296RelA/SpoT, AH and RIS domainsInterproscanJBrowse

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