Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching PF21078 across 148 genomes · 29 ms.

Species with hits:Montipora grisea 9Hydra oligactis 2Aurelia aurita complex sp. Pacific 1Hydractinia echinata 1Hydractinia symbiolongicarpus 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1109.g15.t1PF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Hydractinia echinataENSDJXP00000051870.1PF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Hydra oligactisHOLI00622.G30947PF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Hydra oligactisHOLI00001.G51278PF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02478_t1PF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Montipora griseaANN34928-RAPF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Montipora griseaANN34990-RAPF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Montipora griseaANN39455-RAPF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Montipora griseaANN36474-RAPF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Montipora griseaANN24176-RAPF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Montipora griseaANN20819-RAPF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Montipora griseaANN39271-RAPF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Montipora griseaANN39844-RAPF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse
Montipora griseaANN39798-RAPF21078Glutamate dehydrogenase, helical motif 3InterproscanJBrowse

TOP