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Support counts the member genes carrying the term. % of genes is that count over all 305 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21600 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE | 258 / 305 | 84.6% | 99.2% of 260 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 265 / 305 | 86.9% | 99.3% of 267 | ≥80% support |
| GO | GO:0001522 Biological Process | pseudouridine synthesis | 264 / 305 | 86.6% | 98.9% of 267 | ≥80% support |
| GO | GO:0009451 Biological Process | RNA modification | 264 / 305 | 86.6% | 98.9% of 267 | ≥80% support |
| GO | GO:0009982 Molecular Function | pseudouridine synthase activity | 264 / 305 | 86.6% | 98.9% of 267 | ≥80% support |
| Pfam | PF00849 | PseudoU_synth_2 — RNA pseudouridylate synthase | 242 / 305 | 79.3% | 98.8% of 245 | ≥50% support |
| GO | GO:0000455 Biological Process | enzyme-directed rRNA pseudouridine synthesis | 214 / 305 | 70.2% | 80.2% of 267 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g14728.t1 | MBN2492101.1 | RluA family pseudouridine synthase [Planctomycetota bacterium] | Q8ZQ16 Ribosomal large subunit pseudouridine synthase C OS=Salmonel | JBrowse |
| Cassiopea xamachana | Cxam_g3690.t1 | MBN2490462.1 | RluA family pseudouridine synthase [Planctomycetota bacterium] | Q45480 Uncharacterized RNA pseudouridine synthase YlyB OS=Bacillus | JBrowse |
| Cassiopea xamachana | Cxam_g6772.t1 | MBN2491794.1 | RluA family pseudouridine synthase [Planctomycetota bacterium] | Q45480 Uncharacterized RNA pseudouridine synthase YlyB OS=Bacillus | JBrowse |
| Cassiopea xamachana | Cxam_g7311.t1 | MCK5578709.1 | RluA family pseudouridine synthase [Planctomycetota bacterium] | Q8K9J8 Ribosomal large subunit pseudouridine synthase C OS=Buchnera | JBrowse |
| Cassiopea xamachana | Cxam_g965.t1 | WP_170397876.1 | RluA family pseudouridine synthase [Ruegeria arenilitoris] | P50513 Ribosomal large subunit pseudouridine synthase D OS=Zymomona | JBrowse |
| Cassiopea xamachana | Cxam_g9907.t1 | MBN1441628.1 | pseudouridylate synthase [Planctomycetota bacterium] | Q8DBG5 tRNA pseudouridine synthase C OS=Vibrio vulnificus (strain C | JBrowse |
