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Support counts the member genes carrying the term. % of genes is that count over all 921 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD | 758 / 921 | 82.3% | 93.0% of 815 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 789 / 921 | 85.7% | 96.2% of 820 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 760 / 921 | 82.5% | 92.7% of 820 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 759 / 921 | 82.4% | 92.6% of 820 | ≥80% support |
| PANTHER | PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | 608 / 921 | 66.0% | 74.2% of 820 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 730 / 921 | 79.3% | 89.6% of 815 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 626 / 921 | 68.0% | 76.3% of 820 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G51423 | QBF27850.1 | DEAD/DEAH box helicase [Pseudomonas tructae] | P57453 ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp | JBrowse |
| Hydra oligactis | HOLI00001.G51424 | WP_095155584.1 | MULTISPECIES: spermidine synthase [unclassified Pseudomonas] | P9WH04 ATP-dependent RNA helicase DeaD OS=Mycobacterium tuberculosi | JBrowse |
| Hydra oligactis | HOLI00001.G52182 | WP_095159274.1 | DEAD/DEAH box helicase [Pseudomonas sp. Irchel 3E13] | P25888 ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain | JBrowse |
| Hydra oligactis | HOLI00001.G53283 | WP_256587745.1 | MULTISPECIES: ATP-dependent RNA helicase DbpA [unclassified Pseudomonas] | P21693 ATP-dependent RNA helicase DbpA OS=Escherichia coli (strain | JBrowse |
| Hydra oligactis | HOLI00002.G18390 | MBA4241892.1 | ATP-dependent RNA helicase [Sphingobacteriaceae bacterium] | Q8Y8N0 ATP-dependent RNA helicase CshA OS=Listeria monocytogenes se | JBrowse |
| Hydra oligactis | HOLI00014.G10244 | WP_201740858.1 | ATP-dependent RNA helicase DbpA [Rhodoferax sp. TS-BS-61-7] | P21693 ATP-dependent RNA helicase DbpA OS=Escherichia coli (strain | JBrowse |
| Hydra oligactis | HOLI00181.G24843 | XP_012566758.1 | probable ATP-dependent RNA helicase ddx20 isoform X1 [Hydra vulgaris] | P0C218 Probable ATP-dependent RNA helicase DDX20 OS=Danio rerio OX= | JBrowse |
| Hydra oligactis | HOLI00256.G40355 | TXH93486.1 | DEAD/DEAH box helicase [Rheinheimera sp.] | Q8K9H6 ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp | JBrowse |
| Hydra oligactis | HOLI00256.G40356 | TXH93486.1 | DEAD/DEAH box helicase [Rheinheimera sp.] | P9WH04 ATP-dependent RNA helicase DeaD OS=Mycobacterium tuberculosi | JBrowse |
| Hydra oligactis | HOLI00353.G43010 | TXH96106.1 | ATP-dependent RNA helicase DbpA [Rheinheimera sp.] | P21693 ATP-dependent RNA helicase DbpA OS=Escherichia coli (strain | JBrowse |
| Hydra oligactis | HOLI00579.G29240 | XP_002163229.1 | eukaryotic initiation factor 4A-I [Hydra vulgaris] | Q3SZ65 Eukaryotic initiation factor 4A-II OS=Bos taurus OX=9913 GN= | JBrowse |
| Hydra oligactis | HOLI00863.G6366 | XP_002164714.2 | probable ATP-dependent RNA helicase DDX6 [Hydra vulgaris] | Q5ZKB9 Probable ATP-dependent RNA helicase DDX6 OS=Gallus gallus OX | JBrowse |
| Hydra oligactis | HOLI02248.G45852 | XP_023254936.1 | eukaryotic initiation factor 4A-III-like [Seriola lalandi dorsalis] | B5DG42 Eukaryotic initiation factor 4A-III OS=Salmo salar OX=8030 G | JBrowse |
| Hydra oligactis | HOLI02248.G45853 | XP_002166522.2 | eukaryotic initiation factor 4A-III [Hydra vulgaris] | Q9VHS8 Eukaryotic initiation factor 4A-III OS=Drosophila melanogast | JBrowse |
| Hydra oligactis | HOLI07374.G42313 | XP_002166522.2 | eukaryotic initiation factor 4A-III [Hydra vulgaris] | B5FZY7 Eukaryotic initiation factor 4A-III OS=Taeniopygia guttata O | JBrowse |
