← Back to the gene family browser
This orthogroup contains 1,759 genes from 148 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,759 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 1462 / 1,759 | 83.1% | 99.9% of 1,464 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 1493 / 1,759 | 84.9% | 99.9% of 1,494 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 1476 / 1,759 | 83.9% | 98.8% of 1,494 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paramuricea clavata | CAB3978067.1 | CAB3978067.1 | heterogeneous nuclear ribonucleo A B-like isoform X2 [Paramuricea clavata] | Q14103 Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens O | JBrowse |
| Paramuricea clavata | CAB3978068.1 | CAB3978068.1 | heterogeneous nuclear ribonucleo A B-like isoform X2 [Paramuricea clavata] | Q14103 Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens O | JBrowse |
| Paramuricea clavata | CAB3978069.1 | CAB3978069.1 | heterogeneous nuclear ribonucleo A B-like isoform X2 [Paramuricea clavata] | Q14103 Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens O | JBrowse |
| Paramuricea clavata | CAB3984475.1 | CAB3984475.1 | RNA-binding Musashi homolog 2-like [Paramuricea clavata] | Q96DH6 RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=960 | JBrowse |
| Paramuricea clavata | CAB3984476.1 | CAB3984476.1 | RNA-binding Musashi homolog 2-like [Paramuricea clavata] | Q9VVE5 RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melan | JBrowse |
| Paramuricea clavata | CAB3987790.1 | CAB3987790.1 | Hypothetical predicted protein, partial [Paramuricea clavata] | – | JBrowse |
| Paramuricea clavata | CAB3998743.1 | CAB3998743.1 | heterogeneous nuclear ribonucleo A1-like isoform X2 [Paramuricea clavata] | P51992 Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xeno | JBrowse |
| Paramuricea clavata | CAB4010829.1 | CAB4010829.1 | heterogeneous nuclear ribonucleo A0-like [Paramuricea clavata] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Paramuricea clavata | CAB4016432.1 | CAB4016432.1 | heterogeneous nuclear ribonucleo A3-like [Paramuricea clavata] | P17130 Heterogeneous nuclear ribonucleoproteins A1 homolog OS=Xenop | JBrowse |
| Paramuricea clavata | CAB4016433.1 | CAB4016433.1 | heterogeneous nuclear ribonucleo A3-like [Paramuricea clavata] | P51992 Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xeno | JBrowse |
| Paramuricea clavata | CAB4024274.1 | CAB4024274.1 | RNA-binding Musashi homolog 2-like isoform X1, partial [Paramuricea clavata] | Q96DH6 RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=960 | JBrowse |
| Paramuricea clavata | CAB4024275.1 | CAB4024275.1 | RNA-binding Musashi homolog 2-like isoform X2, partial [Paramuricea clavata] | Q96DH6 RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=960 | JBrowse |
| Paramuricea clavata | CAB4039935.1 | CAB4039935.1 | Heterogeneous nuclear ribonucleo A0 [Paramuricea clavata] | Q98SJ2 DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 | JBrowse |
| Paramuricea clavata | CAB4041004.1 | CAB4041004.1 | heterogeneous nuclear ribonucleo A1-like isoform X2 [Paramuricea clavata] | P51992 Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xeno | JBrowse |
