Which species have which data? The matrix below covers all 325 cnidarian species in CnidoSite × 15 data types. A green cell links straight to that module with the species already selected; a blank cell means the data type is genuinely not available for that species in this release. Click a species name to open its species portal, which lists every resource it has on one page.
Showing 14 species in Octocorallia having Gene family (orthogroup) (2026-09-18)
| Species | # | Genome | Gene models | Function | Gene family | RNA-seq | Co-expr. | Single-cell | Proteome | Epigenome | Metagenome | Phenotype | Paleo | Mitogenome | TE | JBrowse |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Eunicella verrucosa EVERR Octocorallia | 9 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Heliopora coerulea HCOER Octocorallia | 9 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Paramuricea clavata PCLAV Octocorallia | 9 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Dendronephthya gigantea DGIGA Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Eunicella cavolini ECAVO Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Leptogorgia sarmentosa LSARM Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Paragorgia papillata PPAPI Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Callogorgia gracilis CGRAC1 Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| Hemicorallium imperiale HIMPE Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| Muricea muricata MMURI Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| Pteroeides griseum PGRIS Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| Chrysogorgia sp. JL179-B06 CSP1 Octocorallia | 5 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | · | · | · | · | ✓ |
| Trachythela sp. YZ-2020 TSP Octocorallia | 5 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | · | · | · | · | ✓ |
| Xenia sp. Carnegie-2017 XSP Octocorallia | 5 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | · | · | · | · | ✓ |
Legend: ✓ = data available (click to open the module for that species) ·
· = not available in this release. The numbers behind this matrix are rebuilt from the
live database every hour; the same table is available as
tab-separated text
for scripted access.
Reading the first two columns. Genome assembly is set when the species has an assembly
record (size, scaffold/contig N50, BUSCO, accession) — all 325 species have one.
Gene models is set only when this database also carries the predicted gene set for that
assembly, which is true for 145 species. A row whose count (#) is 1
therefore means “the assembly is catalogued here, but it has not been annotated in CnidoSite”,
not “data are missing by mistake”.
