Which species have which data? The matrix below covers all 325 cnidarian species in CnidoSite × 15 data types. A green cell links straight to that module with the species already selected; a blank cell means the data type is genuinely not available for that species in this release. Click a species name to open its species portal, which lists every resource it has on one page.
Showing 35 species in Octocorallia having Phenotype (2026-09-18)
| Species | # | Genome | Gene models | Function | Gene family | RNA-seq | Co-expr. | Single-cell | Proteome | Epigenome | Metagenome | Phenotype | Paleo | Mitogenome | TE | JBrowse |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Eunicella verrucosa EVERR Octocorallia | 9 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Heliopora coerulea HCOER Octocorallia | 9 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Paramuricea clavata PCLAV Octocorallia | 9 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Dendronephthya gigantea DGIGA Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Eunicella cavolini ECAVO Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Leptogorgia sarmentosa LSARM Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Paragorgia papillata PPAPI Octocorallia | 7 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | ✓ | · | ✓ |
| Callogorgia gracilis CGRAC1 Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| Hemicorallium imperiale HIMPE Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| Muricea muricata MMURI Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| Pteroeides griseum PGRIS Octocorallia | 6 | ✓ | ✓ | ✓ | ✓ | · | · | · | · | · | · | ✓ | · | · | · | ✓ |
| Corallium rubrum Corallium_rubrum Octocorallia | 4 | ✓ | · | · | · | · | · | · | ✓ | · | · | ✓ | · | ✓ | · | · |
| Briareum asbestinum Briareum_asbestinum Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Cavernularia obesa Cavernularia_obesa Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Dichotella gemmacea Dichotella_gemmacea Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Erythropodium caribaeorum Erythropodium_caribaeorum Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Phenganax marumi Phenganax_marumi Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Phenganax stokvisi Phenganax_stokvisi Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Phenganax subtilis Phenganax_subtilis Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Stylatula elongata Stylatula_elongata Octocorallia | 3 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | ✓ | · | · |
| Antillogorgia americana AAMER Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Eunicea clavigera Eunicea_clavigera Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Eunicea knighti Eunicea_knighti Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Eunicea succinea Eunicea_succinea Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Gorgonia ventalina Gorgonia_ventalina Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Muricea laxa Muricea_laxa Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Nanipora kamurai Nanipora_kamurai Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Paramuricea biscaya Paramuricea_biscaya Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Pteroeides caledonicum Pteroeides_caledonicum Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Pterogorgia guadalupensis Pterogorgia_guadalupensis Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Renilla koellikeri Renilla_koellikeri Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Renilla reniformis Renilla_reniformis Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Sarcophyton elegans Sarcophyton_elegans Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Veretillum cynomorium Veretillum_cynomorium Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
| Virgularia gustaviana Virgularia_gustaviana Octocorallia | 2 | ✓ | · | · | · | · | · | · | · | · | · | ✓ | · | · | · | · |
Legend: ✓ = data available (click to open the module for that species) ·
· = not available in this release. The numbers behind this matrix are rebuilt from the
live database every hour; the same table is available as
tab-separated text
for scripted access.
Reading the first two columns. Genome assembly is set when the species has an assembly
record (size, scaffold/contig N50, BUSCO, accession) — all 325 species have one.
Gene models is set only when this database also carries the predicted gene set for that
assembly, which is true for 145 species. A row whose count (#) is 1
therefore means “the assembly is catalogued here, but it has not been annotated in CnidoSite”,
not “data are missing by mistake”.
