Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching GO:0070041 across 148 genomes · 28 ms.

Species with hits:Hydra oligactis 6Cassiopea xamachana 1Hemicorallium imperiale 1Hydra viridissima 1Morbakka virulenta 1
SpeciesGene IDGene Ontology termMatchSourceBrowser
Cassiopea xamachanaCxam_g28441.t1GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse
Hemicorallium imperialeevm.model.Contig132.513GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse
Hydra oligactisHOLI00001.G51578GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse
Hydra oligactisHOLI02195.G14034GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse
Hydra oligactisHOLI00353.G42839GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse
Hydra oligactisHOLI00002.G20128GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse
Hydra oligactisHOLI00150.G2250GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse
Hydra oligactisHOLI02195.G14035GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023313.1GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse
Morbakka virulentascaffold121.g197.t1GO:0070041rRNA (uridine-C5-)-methyltransferase activityInterproscanJBrowse

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