Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 108 gene–annotation pairs matching IPR000394 across 148 genomes · 29 ms.

Species with hits:Hydra oligactis 46 Montipora grisea 22 Cassiopea xamachana 10 Hydra viridissima 9 Hydractinia symbiolongicarpus 8 Aurelia aurita complex sp. Pacific 7 Stylophora pistillata 6

Species	Gene ID	InterPro term	Match	Source	Browser
Aurelia aurita complex sp. Pacific	scaffold10.g236.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold10.g236.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold10.g236.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold10.g236.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold10.g236.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold10.g236.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold10.g236.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46670	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46670	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46670	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46670	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21194	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21194	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21194	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21194	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21194	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21194	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21194	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21194	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21575	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21575	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G9417	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G9417	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G9417	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G9417	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G9417	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G9417	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G9417	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G9417	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46669	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46669	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46669	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46669	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46669	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46669	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21576	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21576	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21576	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21576	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21576	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI05983.G36107	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI05983.G36107	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra oligactis	HOLI05983.G36107	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02060_t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02060_t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02060_t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02060_t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02060_t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02060_t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02060_t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02060_t1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN32484-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN32484-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN21015-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN21015-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN37728-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Stylophora pistillata	PFX11360.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Stylophora pistillata	PFX11360.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Stylophora pistillata	PFX11360.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Stylophora pistillata	PFX11360.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Stylophora pistillata	PFX11360.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse
Stylophora pistillata	PFX11360.1	IPR000394	RNA polymerase sigma factor 54	Interproscan	JBrowse