Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 16 gene–annotation pairs matching IPR004085 across 148 genomes · 32 ms.

Species with hits:Cassiopea xamachana 4Actinernus sp. WN-2022 2Colpophyllia natans 2Dendrophyllia cribrosa 2Dendrogyra cylindrus 2Exaiptasia diaphana 2Oculina patagonica 2
SpeciesGene IDInterPro termMatchSourceBrowser
Actinernus sp. WN-2022Acti_033921-T1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Actinernus sp. WN-2022Acti_033921-T1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Colpophyllia natansFUN_006258-T1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Colpophyllia natansFUN_006258-T1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Cassiopea xamachanaCxam_g4624.t1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Cassiopea xamachanaCxam_g4624.t1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Cassiopea xamachanaCxam_g4624.t1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Cassiopea xamachanaCxam_g4624.t1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Dendrophyllia cribrosaBRAKERRLHP00000029764.1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Dendrophyllia cribrosaBRAKERRLHP00000029764.1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Dendrogyra cylindrusFUN_005574-T1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Dendrogyra cylindrusFUN_005574-T1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Exaiptasia diaphanaKXJ28913.1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Exaiptasia diaphanaKXJ28913.1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Oculina patagonicaKAL9979913.1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse
Oculina patagonicaKAL9979913.1IPR004085DNA topoisomerase VI, subunit AInterproscanJBrowse

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