Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 13 gene–annotation pairs matching IPR004398 across 148 genomes · 47 ms.

Species with hits:Hydra oligactis 7Calvadosia cruxmelitensis 2Cassiopea xamachana 2Hydractinia echinata 1Hydractinia symbiolongicarpus 1
SpeciesGene IDInterPro termMatchSourceBrowser
Calvadosia cruxmelitensisg294.t1IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Calvadosia cruxmelitensisg294.t1IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Cassiopea xamachanaCxam_g7284.t1IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Cassiopea xamachanaCxam_g7284.t1IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Hydractinia echinataENSDJXP00000046166.1IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Hydra oligactisHOLI00059.G25714IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Hydra oligactisHOLI00059.G25714IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Hydra oligactisHOLI00059.G25714IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Hydra oligactisHOLI00001.G52595IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Hydra oligactisHOLI00001.G52595IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Hydra oligactisHOLI00299.G46493IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Hydra oligactisHOLI00299.G46493IPR004398RNA methyltransferase, RsmDInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02800_t1IPR004398RNA methyltransferase, RsmDInterproscanJBrowse

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