Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 15 gene–annotation pairs matching IPR007634 across 148 genomes · 28 ms.

Species with hits:Hydra oligactis 7 Montipora grisea 3 Aurelia aurita complex sp. Pacific 1 Cassiopea xamachana 1 Hydractinia symbiolongicarpus 1 Hydra viridissima 1 Stylophora pistillata 1

Species	Gene ID	InterPro term	Match	Source	Browser
Aurelia aurita complex sp. Pacific	scaffold10.g236.t1	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g21802.t1	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46670	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21194	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Hydra oligactis	HOLI00014.G9417	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Hydra oligactis	HOLI00299.G46669	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Hydra oligactis	HOLI00001.G53813	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G21576	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Hydra oligactis	HOLI05983.G36107	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g02.02060_t1	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023266.1	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Montipora grisea	ANN27982-RA	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Montipora grisea	ANN37728-RA	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Montipora grisea	ANN24529-RA	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse
Stylophora pistillata	PFX11360.1	IPR007634	RNA polymerase sigma factor 54, DNA-binding	Interproscan	JBrowse