Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching IPR013654 across 148 genomes · 13 ms.

Species with hits:Cassiopea sp. PORT0000214 2Rhopilema esculentum 2Aurelia aurita 1Aurelia sp. 4 Dawson et al 2005 1Cassiopea xamachana 1Hydra oligactis 1Mastigias papua 1Nemopilema nomurai 1
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia auritascaffold29.g91.t1IPR013654PAS fold-2InterproscanJBrowse
Aurelia sp. 4 Dawson et al 20054_ENSDKXP00000025864.1IPR013654PAS fold-2InterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000006439.1IPR013654PAS fold-2InterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000006444.1IPR013654PAS fold-2InterproscanJBrowse
Cassiopea xamachanaCxam_g21386.t1IPR013654PAS fold-2InterproscanJBrowse
Hydra oligactisHOLI00002.G20508IPR013654PAS fold-2InterproscanJBrowse
Mastigias papuaBRAKERKYLP00000007795.1IPR013654PAS fold-2InterproscanJBrowse
Nemopilema nomuraiBRAKERMNPP00000001775.1IPR013654PAS fold-2InterproscanJBrowse
Rhopilema esculentumXP_065070332.1IPR013654PAS fold-2InterproscanJBrowse
Rhopilema esculentumXP_065070333.1IPR013654PAS fold-2InterproscanJBrowse

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