Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching IPR038416 across 148 genomes · 47 ms.

Species with hits:Cassiopea xamachana 1Hydractinia symbiolongicarpus 1Montipora grisea 1Morbakka virulenta 1Palythoa mizigama 1
SpeciesGene IDInterPro termMatchSourceBrowser
Cassiopea xamachanaCxam_g5530.t1IPR038416Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamilyInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02443_t1IPR038416Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamilyInterproscanJBrowse
Montipora griseaANN30269-RAIPR038416Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamilyInterproscanJBrowse
Morbakka virulentascaffold121.g348.t1IPR038416Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamilyInterproscanJBrowse
Palythoa mizigamac2780.g012.t1.p1IPR038416Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamilyInterproscanJBrowse

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