Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching IPR050813 across 148 genomes · 37 ms.

Species with hits:Hydra oligactis 3Montipora grisea 3Cassiopea xamachana 2Hydractinia symbiolongicarpus 1Hydra viridissima 1
SpeciesGene IDInterPro termMatchSourceBrowser
Cassiopea xamachanaCxam_g4148.t1IPR050813Bacterial Sigma-70 FactorInterproscanJBrowse
Cassiopea xamachanaCxam_g966.t1IPR050813Bacterial Sigma-70 FactorInterproscanJBrowse
Hydra oligactisHOLI00001.G52590IPR050813Bacterial Sigma-70 FactorInterproscanJBrowse
Hydra oligactisHOLI00299.G46486IPR050813Bacterial Sigma-70 FactorInterproscanJBrowse
Hydra oligactisHOLI00014.G10485IPR050813Bacterial Sigma-70 FactorInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02444_t1IPR050813Bacterial Sigma-70 FactorInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022924.1IPR050813Bacterial Sigma-70 FactorInterproscanJBrowse
Montipora griseaANN26820-RAIPR050813Bacterial Sigma-70 FactorInterproscanJBrowse
Montipora griseaANN25129-RAIPR050813Bacterial Sigma-70 FactorInterproscanJBrowse
Montipora griseaANN39023-RAIPR050813Bacterial Sigma-70 FactorInterproscanJBrowse

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