Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching PTHR11061 across 148 genomes · 27 ms.

Species with hits:Hydra oligactis 6Cassiopea xamachana 1Hemicorallium imperiale 1Hydra viridissima 1Morbakka virulenta 1
SpeciesGene IDPANTHER termMatchSourceBrowser
Cassiopea xamachanaCxam_g28441.t1PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse
Hemicorallium imperialeevm.model.Contig132.513PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse
Hydra oligactisHOLI00001.G51578PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse
Hydra oligactisHOLI02195.G14034PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse
Hydra oligactisHOLI00353.G42839PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse
Hydra oligactisHOLI00002.G20128PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse
Hydra oligactisHOLI00150.G2250PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse
Hydra oligactisHOLI02195.G14035PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023313.1PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse
Morbakka virulentascaffold121.g197.t1PTHR11061RNA M5U METHYLTRANSFERASEInterproscanJBrowse

TOP