Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 13 gene–annotation pairs matching PTHR30027 across 148 genomes · 5077 ms.

Species with hits:HOLIG 5CCRUX 2HVIRI 2CXAMA 1HECHI 1HSYMB 1SPIST 1
SpeciesGene IDPANTHER termMatchSourceBrowser
CCRUXg874.t1PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
CCRUXg652.t1PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
CXAMACxam_g4266.t1PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
HECHIENSDJXP00000054681.1PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
HOLIGHOLI00001.G53222PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
HOLIGHOLI01928.G28198PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
HOLIGHOLI00643.G15821PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
HOLIGHOLI00014.G9888PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
HOLIGHOLI00002.G19212PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
HSYMBHSymV2.0_g02.02709_t1PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
HVIRIg19681.t1.1PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
HVIRIBRAKERKREP00000022601.1PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse
SPISTPFX11294.1PTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE EInterproscanJBrowse

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