Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PTHR46111 across 148 genomes · 30 ms.

Species with hits:Hydra oligactis 7Cassiopea xamachana 1Hydra viridissima 1Morbakka virulenta 1Turritopsis rubra 1
SpeciesGene IDPANTHER termMatchSourceBrowser
Cassiopea xamachanaCxam_g4154.t1PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Hydra oligactisHOLI00002.G20613PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Hydra oligactisHOLI00592.G59024PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Hydra oligactisHOLI00059.G26245PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Hydra oligactisHOLI01423.G1588PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Hydra oligactisHOLI00014.G9487PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Hydra oligactisHOLI00002.G20861PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Hydra oligactisHOLI00001.G51847PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022477.1PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Morbakka virulentascaffold121.g203.t1PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse
Turritopsis rubraBRAKERIOWP00000003511.1PTHR46111RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE IInterproscanJBrowse

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