Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 32 gene–annotation pairs matching PF00216 across 148 genomes · 5730 ms.

Species with hits:HOLIG 16 CXAMA 5 HVIRI 4 TRUBR 2 CSP1 1 HSYMB 1 LSCAB 1 MGRIS 1 SPIST 1

Species	Gene ID	Pfam term	Match	Source	Browser
CSP1	Csp0G359180	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
CXAMA	Cxam_g6320.t1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
CXAMA	Cxam_g20525.t1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
CXAMA	Cxam_g6069.t1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
CXAMA	Cxam_g2207.t1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
CXAMA	Cxam_g28478.t1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00059.G26017	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00001.G53827	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00002.G21966	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00059.G26357	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00001.G49333	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00823.G35798	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00059.G26097	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00150.G2236	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00691.G34920	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI02195.G14124	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00001.G49306	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00001.G52943	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00002.G19921	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00001.G51487	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00622.G31115	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HOLIG	HOLI00823.G35766	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HSYMB	HSymV2.0_g02.02463_t1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HVIRI	BRAKERKREP00000022696.1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HVIRI	g19574.t1.1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HVIRI	g21014.t1.1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
HVIRI	BRAKERKREP00000023449.1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
LSCAB	ANN35570-RA	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
MGRIS	ANN35948-RA	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
SPIST	PFX12132.1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
TRUBR	g12511.t1.1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse
TRUBR	BRAKERIOWP00000005615.1	PF00216	Bacterial DNA-binding protein	Interproscan	JBrowse