Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 44 gene–annotation pairs matching PF00263 across 148 genomes · 9499 ms.

Species with hits:HOLIG 22CXAMA 7AAURI2 4HVIRI 3MVIRU 3MGRIS 2ASP1 1CCRUX 1SPIST 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold10.g242.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
AAURI2scaffold1904.g5.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
AAURI2scaffold683.g5.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
AAURI2scaffold1004.g11.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
ASP1Acti_006374-T1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
CCRUXg2035.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
CXAMACxam_g26417.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
CXAMACxam_g16751.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
CXAMACxam_g2276.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
CXAMACxam_g7649.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
CXAMACxam_g18743.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
CXAMACxam_g1706.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
CXAMACxam_g20526.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00580.G30107PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00059.G25656PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00001.G50157PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00001.G50175PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI03869.G56388PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00014.G10587PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI02858.G48437PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI02195.G13990PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00002.G18537PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00256.G40603PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00256.G40657PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00001.G52564PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00001.G53428PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI01632.G57193PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00001.G50853PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00014.G9619PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00504.G55152PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00001.G50310PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00691.G35125PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00014.G10200PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI00150.G1951PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HOLIGHOLI02859.G40080PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HVIRIBRAKERKREP00000023172.1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HVIRIBRAKERKREP00000022639.1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
HVIRIBRAKERKREP00000022714.1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
MGRISANN30835-RAPF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
MGRISANN24432-RAPF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
MVIRUscaffold121.g64.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
MVIRUscaffold121.g216.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
MVIRUscaffold121.g280.t1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse
SPISTPFX10334.1PF00263Bacterial type II and III secretion system proteinInterproscanJBrowse

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