Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF00336 across 148 genomes · 5537 ms.

Species with hits:AMICR 1AMILL 1ASELA 1HSYMB 1LSCAB 1MCACT 1MCAPI 1TSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AMICRamic_s0373.g6.t1PF00336DNA polymerase (viral) C-terminal domainInterproscanJBrowse
AMILLXP_044183716.1PF00336DNA polymerase (viral) C-terminal domainInterproscanJBrowse
ASELAasel_s0370.g9.t1PF00336DNA polymerase (viral) C-terminal domainInterproscanJBrowse
HSYMBHSymV2.0_g11.20472_t1PF00336DNA polymerase (viral) C-terminal domainInterproscanJBrowse
LSCABANN31276-RAPF00336DNA polymerase (viral) C-terminal domainInterproscanJBrowse
MCACTBRAKERNUSP00000034449.1PF00336DNA polymerase (viral) C-terminal domainInterproscanJBrowse
MCAPIg30697.t1PF00336DNA polymerase (viral) C-terminal domainInterproscanJBrowse
TSPClavulariidae_g19272PF00336DNA polymerase (viral) C-terminal domainInterproscanJBrowse

TOP