Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 34 gene–annotation pairs matching PF00460 across 148 genomes · 30 ms.

Species with hits:Hydra oligactis 14Montipora grisea 6Cassiopea xamachana 5Hydra viridissima 4Calvadosia cruxmelitensis 3Hydractinia symbiolongicarpus 2
SpeciesGene IDPfam termMatchSourceBrowser
Calvadosia cruxmelitensisg1930.t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Calvadosia cruxmelitensisg1704.t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Calvadosia cruxmelitensisg1703.t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g5542.t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g5545.t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g5543.t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g5548.t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g5549.t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G51392PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G51393PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G9329PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G51384PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G51388PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI04473.G45626PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI04473.G45623PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI01498.G36264PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G9330PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G9334PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G9328PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI04473.G45621PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G9325PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G9326PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02808_t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02295_t1PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023770.1PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023062.1PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022480.1PF00460Flagella basal body rod proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023320.1PF00460Flagella basal body rod proteinInterproscanJBrowse
Montipora griseaANN38191-RAPF00460Flagella basal body rod proteinInterproscanJBrowse
Montipora griseaANN33848-RAPF00460Flagella basal body rod proteinInterproscanJBrowse
Montipora griseaANN22450-RAPF00460Flagella basal body rod proteinInterproscanJBrowse
Montipora griseaANN40198-RAPF00460Flagella basal body rod proteinInterproscanJBrowse
Montipora griseaANN34472-RAPF00460Flagella basal body rod proteinInterproscanJBrowse
Montipora griseaANN40197-RAPF00460Flagella basal body rod proteinInterproscanJBrowse

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