Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 36 gene–annotation pairs matching PF01258 across 148 genomes · 57 ms.

Species with hits:Montipora grisea 16Hydra oligactis 9Cassiopea xamachana 4Calvadosia cruxmelitensis 2Aurelia aurita complex sp. Pacific 1Hydractinia symbiolongicarpus 1Hydra viridissima 1Stylophora pistillata 1Thelohanellus kitauei 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g169.t1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Calvadosia cruxmelitensisg1263.t1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Calvadosia cruxmelitensisg253.t1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Cassiopea xamachanaCxam_g12246.t1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Cassiopea xamachanaCxam_g1536.t1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Cassiopea xamachanaCxam_g11553.t1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Cassiopea xamachanaCxam_g26126.t1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra oligactisHOLI00001.G52101PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra oligactisHOLI00353.G43251PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra oligactisHOLI02859.G40010PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra oligactisHOLI03869.G56424PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra oligactisHOLI01498.G36374PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra oligactisHOLI01632.G57129PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra oligactisHOLI00353.G43304PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra oligactisHOLI00001.G49504PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra oligactisHOLI00014.G10373PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02258_t1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023593.1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN22314-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN37671-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN41471-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN24750-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN36955-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN28657-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN35981-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN26154-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN35297-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN35098-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN36957-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN33364-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN33064-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN36433-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN31549-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Montipora griseaANN28656-RAPF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Stylophora pistillataPFX11048.1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse
Thelohanellus kitaueiKII72651.1PF01258Prokaryotic dksA/traR C4-type zinc fingerInterproscanJBrowse

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