Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF01488 across 148 genomes · 35 ms.

Species with hits:Hydra oligactis 10Calvadosia cruxmelitensis 2Hydra viridissima 2Aurelia aurita complex sp. Pacific 1Acropora gemmifera 1Cassiopea xamachana 1Exaiptasia diaphana 1Montipora capitata 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold272.g23.t1PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Acropora gemmiferaagem_s0097.g2.t2PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Calvadosia cruxmelitensisg668.t1PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Calvadosia cruxmelitensisg9.t1PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Cassiopea xamachanaCxam_g28419.t1PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Exaiptasia diaphanaKXJ21924.1PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI03622.G38831PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI00256.G40469PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI00150.G2064PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI00001.G53590PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI01298.G15167PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI00001.G52823PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI00256.G40411PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI00002.G21494PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI00059.G25866PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra oligactisHOLI00655.G56916PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022468.1PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023052.1PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse
Montipora capitatag11537.t1PF01488Shikimate / quinate 5-dehydrogenaseInterproscanJBrowse

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