Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 43 gene–annotation pairs matching PF02254 across 148 genomes · 6905 ms.

Species with hits:CXAMA 11HOLIG 9MGRIS 9AAURI2 3CCRUX 3HSYMB 3PMIZI 3HVIRI 1TRUBR 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold2046.g5.t1PF02254TrkA-N domainInterproscanJBrowse
AAURI2scaffold2046.g5.t1PF02254TrkA-N domainInterproscanJBrowse
AAURI2scaffold683.g19.t1PF02254TrkA-N domainInterproscanJBrowse
CCRUXg1761.t1PF02254TrkA-N domainInterproscanJBrowse
CCRUXg1761.t1PF02254TrkA-N domainInterproscanJBrowse
CCRUXg706.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g981.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g11199.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g8652.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g16337.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g16337.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g4585.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g4585.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g1445.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g1445.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g11354.t1PF02254TrkA-N domainInterproscanJBrowse
CXAMACxam_g6825.t1PF02254TrkA-N domainInterproscanJBrowse
HOLIGHOLI00014.G9863PF02254TrkA-N domainInterproscanJBrowse
HOLIGHOLI00001.G49576PF02254TrkA-N domainInterproscanJBrowse
HOLIGHOLI00264.G3269PF02254TrkA-N domainInterproscanJBrowse
HOLIGHOLI00001.G52830PF02254TrkA-N domainInterproscanJBrowse
HOLIGHOLI00001.G52830PF02254TrkA-N domainInterproscanJBrowse
HOLIGHOLI00256.G40398PF02254TrkA-N domainInterproscanJBrowse
HOLIGHOLI00059.G26412PF02254TrkA-N domainInterproscanJBrowse
HOLIGHOLI00001.G51232PF02254TrkA-N domainInterproscanJBrowse
HOLIGHOLI00014.G10460PF02254TrkA-N domainInterproscanJBrowse
HSYMBHSymV2.0_g17.25685_t1PF02254TrkA-N domainInterproscanJBrowse
HSYMBHSymV2.0_g17.25685_t1PF02254TrkA-N domainInterproscanJBrowse
HSYMBHSymV2.0_g02.02345_t1PF02254TrkA-N domainInterproscanJBrowse
HVIRIBRAKERKREP00000023061.1PF02254TrkA-N domainInterproscanJBrowse
MGRISANN36072-RAPF02254TrkA-N domainInterproscanJBrowse
MGRISANN36072-RAPF02254TrkA-N domainInterproscanJBrowse
MGRISANN27297-RAPF02254TrkA-N domainInterproscanJBrowse
MGRISANN27297-RAPF02254TrkA-N domainInterproscanJBrowse
MGRISANN21798-RAPF02254TrkA-N domainInterproscanJBrowse
MGRISANN21798-RAPF02254TrkA-N domainInterproscanJBrowse
MGRISANN31169-RAPF02254TrkA-N domainInterproscanJBrowse
MGRISANN31169-RAPF02254TrkA-N domainInterproscanJBrowse
MGRISANN23296-RAPF02254TrkA-N domainInterproscanJBrowse
PMIZIc3001.g010.t1.p1PF02254TrkA-N domainInterproscanJBrowse
PMIZIc3001.g010.t1.p1PF02254TrkA-N domainInterproscanJBrowse
PMIZIc3192.g001.t1.p1PF02254TrkA-N domainInterproscanJBrowse
TRUBRBRAKERIOWP00000020385.1PF02254TrkA-N domainInterproscanJBrowse

TOP