Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 18 gene–annotation pairs matching PF03119 across 148 genomes · 8221 ms.

Species with hits:MGRIS 7HOLIG 3CXAMA 2CCRUX 1DCRIB 1HECHI 1HVIRI 1LSCAB 1MVIRU 1
SpeciesGene IDPfam termMatchSourceBrowser
CCRUXg1204.t1PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
CXAMACxam_g5320.t1PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
CXAMACxam_g1221.t1PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
DCRIBBRAKERRLHP00000046941.1PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
HECHIENSDJXP00000046248.1PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
HOLIGHOLI00150.G2460PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
HOLIGHOLI00353.G42758PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
HOLIGHOLI00002.G19023PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
HVIRIBRAKERKREP00000023314.1PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
LSCABANN35389-RAPF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
MGRISANN39190-RAPF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
MGRISANN24846-RAPF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
MGRISANN27740-RAPF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
MGRISANN25893-RAPF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
MGRISANN29833-RAPF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
MGRISANN33349-RAPF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
MGRISANN40610-RAPF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse
MVIRUscaffold121.g25.t1PF03119NAD-dependent DNA ligase C4 zinc finger domainInterproscanJBrowse

TOP