Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 30 gene–annotation pairs matching PF03534 across 148 genomes · 4883 ms.

Species with hits:HOLIG 8CGIGA 4AMEDI 2PMIZI 2PPENN 2TSTEP 2AEQUI 1AIDSS 1ASP2 1ATENE 1AXANT 1DLINE 1EDIAP 1EVERR 1LSARM 1MSENI 1
SpeciesGene IDPfam termMatchSourceBrowser
AEQUIEGACTEQ4350024932-PAPF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
AIDSSalvinactis_v1_g20238PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
AMEDIENSQPTP00000032475.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
AMEDIENSQPTP00000070939.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
ASP2Actinostola_13075PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
ATENEXP_031575120.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
AXANTENSOJPP00000000732.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
CGIGAENSKFPP00000021708.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
CGIGAENSKFPP00000029141.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
CGIGAENSKFPP00000029152.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
CGIGAENSKFPP00000021714.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
DLINEENSDLIP00000014587.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
EDIAPKXJ19478.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
EVERRENSNOVP00005040455.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
HOLIGHOLI00002.G18221PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
HOLIGHOLI00002.G19664PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
HOLIGHOLI00002.G20384PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
HOLIGHOLI00001.G50095PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
HOLIGHOLI00001.G50096PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
HOLIGHOLI02899.G59208PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
HOLIGHOLI02899.G59208PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
HOLIGHOLI02899.G59208PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
LSARMENSAPQP00000000541.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
MSENIENSDTNP00000002013.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
PMIZIc3086.g008.t1.p1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
PMIZIc3242.g002.t1.p1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
PPENNENSDKPP00000040981.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
PPENNENSDKPP00000040972.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
TSTEPBRAKERFUXP00000046261.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse
TSTEPBRAKERFUXP00000013768.1PF03534Salmonella virulence plasmid 65kDa B proteinInterproscanJBrowse

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