Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF04392 across 148 genomes · 33 ms.

Species with hits:Hydra viridissima 3Hydra oligactis 2Aurelia aurita complex sp. Pacific 1Calvadosia cruxmelitensis 1Cassiopea xamachana 1Palythoa umbrosa 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g57.t1PF04392ABC transporter substrate binding proteinInterproscanJBrowse
Calvadosia cruxmelitensisg1035.t1PF04392ABC transporter substrate binding proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g2856.t1PF04392ABC transporter substrate binding proteinInterproscanJBrowse
Hydra oligactisHOLI00059.G26518PF04392ABC transporter substrate binding proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G10056PF04392ABC transporter substrate binding proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023162.1PF04392ABC transporter substrate binding proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023243.1PF04392ABC transporter substrate binding proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023293.1PF04392ABC transporter substrate binding proteinInterproscanJBrowse
Palythoa umbrosac2285.g003.t1PF04392ABC transporter substrate binding proteinInterproscanJBrowse

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