Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 16 gene–annotation pairs matching PF04452 across 148 genomes · 7660 ms.

Species with hits:HOLIG 5HECHI 3CCRUX 2MGRIS 2CXAMA 1HSYMB 1HVIRI 1SPIST 1
SpeciesGene IDPfam termMatchSourceBrowser
CCRUXg874.t1PF04452RNA methyltransferase domainInterproscanJBrowse
CCRUXg652.t1PF04452RNA methyltransferase domainInterproscanJBrowse
CXAMACxam_g4266.t1PF04452RNA methyltransferase domainInterproscanJBrowse
HECHIENSDJXP00000054681.1PF04452RNA methyltransferase domainInterproscanJBrowse
HECHIENSDJXP00000054656.1PF04452RNA methyltransferase domainInterproscanJBrowse
HECHIENSDJXP00000054656.1PF04452RNA methyltransferase domainInterproscanJBrowse
HOLIGHOLI00001.G53222PF04452RNA methyltransferase domainInterproscanJBrowse
HOLIGHOLI01928.G28198PF04452RNA methyltransferase domainInterproscanJBrowse
HOLIGHOLI00643.G15821PF04452RNA methyltransferase domainInterproscanJBrowse
HOLIGHOLI00014.G9888PF04452RNA methyltransferase domainInterproscanJBrowse
HOLIGHOLI00002.G19212PF04452RNA methyltransferase domainInterproscanJBrowse
HSYMBHSymV2.0_g02.02709_t1PF04452RNA methyltransferase domainInterproscanJBrowse
HVIRIBRAKERKREP00000022601.1PF04452RNA methyltransferase domainInterproscanJBrowse
MGRISANN26870-RAPF04452RNA methyltransferase domainInterproscanJBrowse
MGRISANN22106-RAPF04452RNA methyltransferase domainInterproscanJBrowse
SPISTPFX11294.1PF04452RNA methyltransferase domainInterproscanJBrowse

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