Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 18 gene–annotation pairs matching PF04940 across 148 genomes · 8032 ms.

Species with hits:AMEDI 2AEQUI 1HOLIG 1TRENI 1TKITA 1TDOHR 1SRADI 1MEFFL 1EDIAP 1EHORR 1ALIUI 1CGIGA 1CCOCK 1BCFM 1ATENE 1ASPAT 1TSTEP 1
SpeciesGene IDPfam termMatchSourceBrowser
AEQUIEGACTEQ4350020607-PAPF04940Sensors of blue-light using FADInterproscanJBrowse
ALIUIgene10641.t1PF04940Sensors of blue-light using FADInterproscanJBrowse
AMEDIENSQPTP00000013555.1PF04940Sensors of blue-light using FADInterproscanJBrowse
AMEDIENSQPTP00000055446.1PF04940Sensors of blue-light using FADInterproscanJBrowse
ASPATENSEWQP00005047874.1PF04940Sensors of blue-light using FADInterproscanJBrowse
ATENEXP_031575253.1PF04940Sensors of blue-light using FADInterproscanJBrowse
BCFMM_g34488.t1PF04940Sensors of blue-light using FADInterproscanJBrowse
CCOCKENSQNNP00000013863.1PF04940Sensors of blue-light using FADInterproscanJBrowse
CGIGAENSKFPP00000009692.1PF04940Sensors of blue-light using FADInterproscanJBrowse
EDIAPKXJ26545.1PF04940Sensors of blue-light using FADInterproscanJBrowse
EHORRENSJVNP00000030881.1PF04940Sensors of blue-light using FADInterproscanJBrowse
HOLIGHOLI00059.G25886PF04940Sensors of blue-light using FADInterproscanJBrowse
MEFFLENSTIFP00000018773.1PF04940Sensors of blue-light using FADInterproscanJBrowse
SRADIENSTHXP00000003741.1PF04940Sensors of blue-light using FADInterproscanJBrowse
TDOHRTur_r2.0_p0024.1.g53280.t1PF04940Sensors of blue-light using FADInterproscanJBrowse
TKITAKII67389.1PF04940Sensors of blue-light using FADInterproscanJBrowse
TRENIENSHNZP00000024100.1PF04940Sensors of blue-light using FADInterproscanJBrowse
TSTEPBRAKERFUXP00000041818.1PF04940Sensors of blue-light using FADInterproscanJBrowse

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