Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 31 gene–annotation pairs matching PF05496 across 148 genomes · 13 ms.

Species with hits:Hydra oligactis 7Montipora grisea 5Morbakka virulenta 2Cassiopea xamachana 2Aurelia aurita complex sp. Pacific 1Scolanthus callimorphus 1Rhodactis osculifera 1Platygyra sinensis 1Montipora efflorescens 1Hydra viridissima 1Hydractinia echinata 1Acropora cervicornis 1Edwardsia elegans 1Chrysogorgia sp. JL179-B06 1Calvadosia cruxmelitensis 1Acropora yongei 1Actinernus sp. WN-2022 1Acropora selago 1Turritopsis rubra 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1904.g1.t1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Acropora cervicornisKAK2560652.1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Acropora selagoasel_s5204.g1.t1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Actinernus sp. WN-2022Acti_006440-T1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Acropora yongeiayon_s0313.g9.t1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Calvadosia cruxmelitensisg14.t1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Chrysogorgia sp. JL179-B06Csp0G359090PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Cassiopea xamachanaCxam_g15628.t1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2254.t1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Edwardsia elegansjg3134.t1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Hydractinia echinataENSDJXP00000044787.1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Hydra oligactisHOLI00002.G19149PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Hydra oligactisHOLI00353.G42848PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50838PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Hydra oligactisHOLI00580.G30012PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55041PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Hydra oligactisHOLI00002.G17663PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Hydra oligactisHOLI00059.G25614PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022994.1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Montipora efflorescensENSTIFP00000041850.1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Montipora griseaANN38136-RAPF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Montipora griseaANN35420-RAPF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Montipora griseaANN29073-RAPF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Montipora griseaANN32242-RAPF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Montipora griseaANN21221-RAPF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Morbakka virulentascaffold108.g57.t1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Morbakka virulentascaffold121.g54.t1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Platygyra sinensisevm.model.contig_71076.1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000033485.1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.47073.1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse
Turritopsis rubraBRAKERIOWP00000010997.1PF05496Holliday junction DNA helicase RuvB P-loop domainInterproscanJBrowse

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