Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF07516 across 148 genomes · 6521 ms.

Species with hits:HOLIG 6HECHI 3CXAMA 2AAURI2 1ASP1 1CCRUX 1HVIRI 1LSCAB 1MGRIS 1MVIRU 1TRUBR 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold272.g32.t1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
ASP1Acti_006295-T1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
CCRUXg286.t1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
CXAMACxam_g28464.t1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
CXAMACxam_g22689.t1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HECHIENSDJXP00000049483.1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HECHIENSDJXP00000048749.1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HECHIENSDJXP00000049488.1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HOLIGHOLI00014.G10637PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HOLIGHOLI00002.G20800PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HOLIGHOLI00001.G51832PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HOLIGHOLI00592.G59067PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HOLIGHOLI03622.G38802PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HOLIGHOLI00002.G20799PF07516SecA Wing and Scaffold domainInterproscanJBrowse
HVIRIBRAKERKREP00000023631.1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
LSCABANN35256-RAPF07516SecA Wing and Scaffold domainInterproscanJBrowse
MGRISANN27550-RAPF07516SecA Wing and Scaffold domainInterproscanJBrowse
MVIRUscaffold121.g267.t1PF07516SecA Wing and Scaffold domainInterproscanJBrowse
TRUBRBRAKERIOWP00000004354.1PF07516SecA Wing and Scaffold domainInterproscanJBrowse

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