Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching PF08446 across 148 genomes · 15 ms.

Species with hits:Cassiopea sp. PORT0000214 2Rhopilema esculentum 2Aurelia aurita 1Aurelia sp. 4 Dawson et al 2005 1Cassiopea xamachana 1Hydra oligactis 1Mastigias papua 1Nemopilema nomurai 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia auritascaffold29.g91.t1PF08446PAS foldInterproscanJBrowse
Aurelia sp. 4 Dawson et al 20054_ENSDKXP00000025864.1PF08446PAS foldInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000006439.1PF08446PAS foldInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000006444.1PF08446PAS foldInterproscanJBrowse
Cassiopea xamachanaCxam_g21386.t1PF08446PAS foldInterproscanJBrowse
Hydra oligactisHOLI00002.G20508PF08446PAS foldInterproscanJBrowse
Mastigias papuaBRAKERKYLP00000007795.1PF08446PAS foldInterproscanJBrowse
Nemopilema nomuraiBRAKERMNPP00000001775.1PF08446PAS foldInterproscanJBrowse
Rhopilema esculentumXP_065070332.1PF08446PAS foldInterproscanJBrowse
Rhopilema esculentumXP_065070333.1PF08446PAS foldInterproscanJBrowse

TOP