Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 41 gene–annotation pairs matching PF09339 across 148 genomes · 27 ms.

Species with hits:Hydra oligactis 18Cassiopea xamachana 4Eunicella cavolini 3Palythoa mizigama 3Aurelia aurita complex sp. Pacific 2Actinoscyphia liui 2Chrysogorgia sp. JL179-B06 2Alvinactis idsseensis sp. Nov. 1Acropora millepora 1Dendrophyllia cribrosa 1Millepora complanata 1Montipora efflorescens 1Montipora grisea 1Muricea muricata 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1747.g16.t1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold2160.g4.t1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Alvinactis idsseensis sp. Nov.alvinactis_v1_g27171PF09339IclR helix-turn-helix domainInterproscanJBrowse
Actinoscyphia liuigene18546.t1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Actinoscyphia liuigene07296.t1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Acropora milleporaXP_044167888.1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Chrysogorgia sp. JL179-B06Csp0G010050PF09339IclR helix-turn-helix domainInterproscanJBrowse
Chrysogorgia sp. JL179-B06Csp0G121760PF09339IclR helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g5041.t1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g1615.t1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2949.t1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g634.t1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Dendrophyllia cribrosaBRAKERRLHP00000025251.1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Eunicella cavoliniENSLDHP00000025499.1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Eunicella cavoliniENSLDHP00000025507.1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Eunicella cavoliniENSLDHP00000025515.1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI01051.G37053PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49922PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10558PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9501PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52314PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00150.G2089PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51773PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00655.G56689PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50119PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00264.G3450PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50530PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00655.G56911PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G49635PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI01498.G36301PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI02137.G15426PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00823.G36057PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51991PF09339IclR helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50080PF09339IclR helix-turn-helix domainInterproscanJBrowse
Millepora complanataENSODKP00000026637.1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Montipora efflorescensENSTIFP00000025131.1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Montipora griseaANN36150-RAPF09339IclR helix-turn-helix domainInterproscanJBrowse
Muricea muricataBRAKERXEIP00000011109.1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Palythoa mizigamac2377.g006.t1.p1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Palythoa mizigamac2310.g006.t1.p1PF09339IclR helix-turn-helix domainInterproscanJBrowse
Palythoa mizigamac2585.g005.t1.p1PF09339IclR helix-turn-helix domainInterproscanJBrowse

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