Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF12728 across 148 genomes · 27 ms.

Species with hits:Hydra oligactis 4Cassiopea xamachana 3Calvadosia cruxmelitensis 1Morbakka virulenta 1
SpeciesGene IDPfam termMatchSourceBrowser
Calvadosia cruxmelitensisg699.t1PF12728Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g3831.t1PF12728Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g15550.t1PF12728Helix-turn-helix domainInterproscanJBrowse
Cassiopea xamachanaCxam_g997.t1PF12728Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00059.G26411PF12728Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI00299.G46735PF12728Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI02137.G15439PF12728Helix-turn-helix domainInterproscanJBrowse
Hydra oligactisHOLI01937.G38222PF12728Helix-turn-helix domainInterproscanJBrowse
Morbakka virulentascaffold121.g188.t1PF12728Helix-turn-helix domainInterproscanJBrowse

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