Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 22 gene–annotation pairs matching PF12849 across 148 genomes · 40 ms.

Species with hits:Hydra oligactis 14Cassiopea xamachana 3Montipora grisea 3Aurelia aurita complex sp. Pacific 1Hydractinia symbiolongicarpus 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g209.t1PF12849PBP superfamily domainInterproscanJBrowse
Cassiopea xamachanaCxam_g28462.t1PF12849PBP superfamily domainInterproscanJBrowse
Cassiopea xamachanaCxam_g996.t1PF12849PBP superfamily domainInterproscanJBrowse
Cassiopea xamachanaCxam_g1277.t1PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00002.G20624PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00059.G26486PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10062PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00002.G21710PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00264.G3105PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00264.G3357PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52043PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10061PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50884PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI02137.G15458PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI01298.G14981PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10193PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52929PF12849PBP superfamily domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10207PF12849PBP superfamily domainInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02359_t1PF12849PBP superfamily domainInterproscanJBrowse
Montipora griseaANN40227-RAPF12849PBP superfamily domainInterproscanJBrowse
Montipora griseaANN39902-RAPF12849PBP superfamily domainInterproscanJBrowse
Montipora griseaANN24199-RAPF12849PBP superfamily domainInterproscanJBrowse

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