Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF13333 across 148 genomes · 97 ms.

Species with hits:Hydra oligactis 4Calvadosia cruxmelitensis 1Cassiopea xamachana 1Exaiptasia diaphana 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Calvadosia cruxmelitensisg2031.t1PF13333Integrase core domainInterproscanJBrowse
Cassiopea xamachanaCxam_g27145.t1PF13333Integrase core domainInterproscanJBrowse
Exaiptasia diaphanaKXJ04747.1PF13333Integrase core domainInterproscanJBrowse
Hydra oligactisHOLI00059.G26039PF13333Integrase core domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53533PF13333Integrase core domainInterproscanJBrowse
Hydra oligactisHOLI00059.G26022PF13333Integrase core domainInterproscanJBrowse
Hydra oligactisHOLI00059.G26082PF13333Integrase core domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023079.1PF13333Integrase core domainInterproscanJBrowse

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