Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF13379 across 148 genomes · 56 ms.

Species with hits:Cassiopea xamachana 3Hydra oligactis 2Aurelia aurita complex sp. Pacific 1Trachythela sp. YZ-2020 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold228.g59.t1PF13379NMT1-like familyInterproscanJBrowse
Cassiopea xamachanaCxam_g3372.t1PF13379NMT1-like familyInterproscanJBrowse
Cassiopea xamachanaCxam_g187.t1PF13379NMT1-like familyInterproscanJBrowse
Cassiopea xamachanaCxam_g3371.t1PF13379NMT1-like familyInterproscanJBrowse
Hydra oligactisHOLI00001.G50401PF13379NMT1-like familyInterproscanJBrowse
Hydra oligactisHOLI02137.G15335PF13379NMT1-like familyInterproscanJBrowse
Trachythela sp. YZ-2020Clavulariidae_g13181PF13379NMT1-like familyInterproscanJBrowse

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